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rs198810 chr6:26128390 A>G

Sequence
ggtactgctaagagcctagtccct[A/G]agcaaaggacattcctcgtagctc
ASB in cell types
K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.79 -0.55 5.2·10-40.99 2.98
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Motif analysis

No data available

Genetic associations

GRASP autism comorbid depressive syndrome and alcohol dependence
GTEx eQTL Adipose_Subcutaneous Adrenal_Gland Artery_Aorta Artery_Tibial Brain_Caudate_basal_ganglia Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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