rs200248298 chr10:38526890 G>T
- Sequence
aaaggaatggtgtggaatggaagg[G/T]attcgaatggaatggagtggattg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) K562 (myelogenous leukemia) LNCaP (prostate carcinoma)
- ASB for transcription factors
- EP300_HUMAN ANDR_HUMAN STAT1_HUMAN NCOA3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 2.35 | -1.07 | 2.17 | n/a | n/a | |||
| ANDR_HUMAN | 2.37 | -3.36 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 2.36 | n/a | 2.50 | n/a | No Hit | |||
| NCOA3_HUMAN | 2.27 | -3.65 | 2.50 | n/a | n/a | |||
| NFIB_HUMAN | 2.30 | n/a | 3.00 | n/a | n/a |
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