rs200348 chr14:98914207 A>G
- Sequence
ggaagggagggagggaagaaggaa[A/G]gaaagaagagagggaggaaaggac
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -1.05 | 1.31 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP college completion, hdl cholesterol, infant head circumference, ldl cholesterol change with statins, total cholesterol change with statins