ADASTRA v1.6.10
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Soos
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adastra.autosome.org
rs2004181
chr11:12206676
G
>
A
Sequence
taacttcctcctccagttcccact[G/A]tggccattccaaacctccagcacg
ASB in cell types
K562 (myelogenous leukemia)
monocyte-derived macrophages
ASB for transcription factors
TF65_HUMAN
ZIC2_HUMAN
IKZF1_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN
2.17
n/a
9.4·10
-3
1.00
2.50
n/a
No Hit
ZIC2_HUMAN
1.89
n/a
0.01
1.00
1.33
n/a
n/a
IKZF1_HUMAN
1.87
0.33
0.03
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
college completion
,
cystatin c in serum
,
fasting blood glucose
,
microalbuminuria
,
parkinsons disease
,
triglycerides
,
urinary albumin-to-creatinine ratio
,
years of education
GTEx eQTL
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)