rs200527 chr16:24748642 T>C
- Sequence
ttgtgcataatgtcattcatttca[T/C]ttttcggtgtctgcatctcctctc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.29 | 0.69 | 2.00 | |||
| HEK293 (embryonic kidney) | -0.27 | 0.76 | 1.97 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Pituitary, Skin_Sun_Exposed_Lower_leg, Whole_Blood