rs2005485 chr8:57209879 T>C
- Sequence
gactcaagagggccacgttcaatg[T/C]caacctgacataaggtagtcacct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN ZFX_HUMAN ZN350_HUMAN ZNF24_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.16 | 2.07 | 1.36 | n/a | No Hit | |||
| ZFX_HUMAN | -0.95 | 2.61 | 1.68 | n/a | No Hit | |||
| ZN350_HUMAN | -2.86 | 2.91 | 1.00 | n/a | No Hit | |||
| ZNF24_HUMAN | -0.15 | 2.28 | 1.61 | n/a | n/a | |||
| FOXK2_HUMAN | -1.43 | 1.71 | 1.61 | n/a | n/a |
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