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rs2013070 chr1:15153404 T>C

Sequence
caccacccgtcacacacacgcgcg[T/C]gcgcgcacacacgcatgcacaccg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
SP7_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP7_HUMAN 2.25 -1.81 0.031.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum Adrenal_Gland Artery_Tibial Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Esophagus_Mucosa Esophagus_Muscularis Lung Minor_Salivary_Gland Nerve_Tibial Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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