ADASTRA v1.6.10
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rs201456
chr7:102097779
C
>
G
Sequence
ttgaaaattcttcccgtatcatta[C/G]gtgattgggtctgcctcttgaaag
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CREB1_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN
1.52
-1.05
7.3·10
-3
1.00
1.33
-4.12
Concordant
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5
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Motif analysis
CREB1_HUMAN
Concordant
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Genetic associations
GRASP
adiponectin levels
,
chronic kidney disease
,
height
,
microalbuminuria
,
serum creatinine
GTEx eQTL
Brain_Caudate_basal_ganglia
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
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