rs2021096 chr14:99571659 G>T
- Sequence
agattcttttcttccccactgttt[G/T]cagtaagatttacgatgccagcaa
- ASB in cell types
- LNCaP (prostate carcinoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN HNF4A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.46 | -0.81 | 1.44 | -2.33 | Concordant | |||
| ANDR_HUMAN | 1.72 | -0.47 | 1.44 | -2.70 | Concordant | |||
| HNF4A_HUMAN | 1.65 | -0.22 | 1.33 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
