ADASTRA v1.6.10
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rs203147
chr6:138268125
G
>
A
Sequence
ggtgctggcctgtatccatctctg[G/A]actgaggcatgtcctcttgccccc
ASB in cell types
liver
HepG2 (hepatoblastoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
liver
0.85
-0.11
0.01
1.00
1.33
HepG2 (hepatoblastoma)
-0.33
0.70
0.98
0.03
2.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
arthritis including non-rheumatoid
,
longstanding arthritis
GTEx eQTL
Esophagus_Mucosa
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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