rs203833 chr1:167876803 T>C
- Sequence
tggactcagccttgtgaatgcttt[T/C]gtcaatggactatctgcaaacata
- ASB in cell types
- liver
- ASB for transcription factors
- SP1_HUMAN HNF4A_HUMAN RXRA_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP1_HUMAN | -0.65 | 2.25 | 1.33 | n/a | No Hit | |||
| HNF4A_HUMAN | -1.00 | 1.56 | 1.33 | n/a | No Hit | |||
| RXRA_HUMAN | -0.91 | 1.57 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid