rs2039424 chr9:68817258 G>A
- Sequence
gctgatcagtgtgtcaataagcag[G/A]cactcaccatgcacatttgggctg
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN NR2F6_HUMAN BCL6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | -0.37 | 0.74 | 1.39 | n/a | No Hit | |||
| NR2F6_HUMAN | -1.62 | 1.78 | 1.33 | n/a | n/a | |||
| BCL6_HUMAN | -1.35 | 1.71 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Esophagus_Mucosa, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Thyroid