rs2056933 chr20:8094966 C>A
- Sequence
ttagagttgtgcaatagcacttca[C/A]ataacaattgttgatccttgtgtc
- ASB in cell types
- HepG2 (hepatoblastoma) LNCaP (prostate carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN CEBPB_HUMAN RARA_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.05 | 1.05 | 1.38 | n/a | No Hit | |||
| CEBPB_HUMAN | -0.23 | 1.55 | 1.29 | n/a | No Hit | |||
| RARA_HUMAN | -2.02 | 1.80 | 1.50 | n/a | No Hit | |||
| FOXA2_HUMAN | -0.31 | 0.65 | 1.33 | n/a | No Hit |
Items per page:
1 – 4 of 4