rs205779 chr7:130959905 C>T
- Sequence
ggagagttgcttgaacccaggata[C/T]ggaggttgcagtcagttgagatca
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells) A549 (lung carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXK2_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.94 | n/a | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 0.62 | 1.26 | 1.71 | n/a | No Hit |
Items per page:
1 – 2 of 2