ADASTRA v1.6.10
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rs206439
chr18:10444658
C
>
T
Sequence
cagataattgagatcctggatcta[C/T]attacataaagtggaaaacagaat
ASB in cell types
prostate tumor
ASB for transcription factors
HXB13_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HXB13_HUMAN
2.44
n/a
0.01
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
chronic kidney disease
,
college completion
,
infant head circumference
,
obesity (body mass index (bmi))
,
rheumatoid arthritis
,
total cholesterol
,
years of education
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)