rs2077266 chr10:79094319 C>T
- Sequence
cacgaacgctggggccaaggcggc[C/T]tctgctctccctgcaacccggagg
- ASB in cell types
- T47D (invasive ductal carcinoma) K562 (myelogenous leukemia) MDA-MB-453 (breast adenocarcinoma)
- ASB for transcription factors
- ESR1_HUMAN HIF1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.66 | 0.86 | 1.85 | -2.67 | Concordant | |||
| HIF1A_HUMAN | 1.65 | -1.94 | 1.50 | n/a | No Hit |
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Motif analysis
