ADASTRA v1.6.10
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rs208007
chr17:48154153
T
>
C
Sequence
accgggttaaaactcccattataa[T/C]tgacatagtgttgtgttaacatag
ASB in cell types
K562 (myelogenous leukemia)
HEK293 (embryonic kidney)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.75
-0.20
6.4·10
-11
1.00
2.00
HEK293 (embryonic kidney)
0.49
0.50
0.03
0.05
1.70
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5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
height
,
waist hip ratio
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Liver
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Testis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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