ADASTRA v1.6.10
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rs208390
chr20:53973688
T
>
C
Sequence
agaagtcttgtggagtcctccttg[T/C]aggttgcgggaatagaaactttga
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
NFXL1_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFXL1_HUMAN
n/a
2.47
1.00
1.4·10
-3
2.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
alzheimers disease
,
amyotrophic lateral sclerosis (als)
,
fasting insulin
,
homa-ir
,
hypertension (early onset hypertension)
,
infant head circumference
,
ldl cholesterol
,
prop taste detection threshold
,
total cholesterol
GTEx eQTL
Adipose_Visceral_Omentum
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)