rs2085161 chr15:101107824 T>C
- Sequence
gaatgtaaccatatctggttgata[T/C]agtctttaaagaggtaattaagat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NCOR1_HUMAN TAL1_HUMAN NFIC_HUMAN C2D1A_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOR1_HUMAN | n/a | 3.92 | 2.00 | n/a | n/a | |||
| TAL1_HUMAN | -1.99 | 2.73 | 2.00 | 2.76 | Concordant | |||
| NFIC_HUMAN | n/a | 1.80 | 2.50 | n/a | No Hit | |||
| C2D1A_HUMAN | n/a | 3.20 | 2.00 | n/a | n/a | |||
| SOX6_HUMAN | n/a | 2.94 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP comorbid depressive syndrome and alcohol dependence, high myopia, transmission distortion, waist hip ratio