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rs2086857 chr1:42946675 A>G

Sequence
gtggacagaacagtatgtgcaagg[A/G]gaagaaatggggaccagtcagatt
ASB in cell types
SK-BR-3 (breast adenocarcinoma) K562 (myelogenous leukemia)
ASB for transcription factors
ERR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ERR1_HUMAN 2.39 n/a 5.9·10-31.00 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts

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