rs208948 chr16:22813284 T>G
- Sequence
tgtctctgtgtgaagaagccctcc[T/G]cactcagccctcggcgaccctctg
- ASB in cell types
- HepG2 (hepatoblastoma) foreskin keratinocyte erythroid progenitors H1 (embryonic stem cells)
- ASB for transcription factors
- CTCF_HUMAN REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.59 | 0.71 | 1.40 | n/a | No Hit | |||
| REST_HUMAN | 0.53 | 1.14 | 1.89 | n/a | No Hit |
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