rs209607 chr1:40450546 T>C
- Sequence
tttgtgggctgtgtctgcccaccg[T/C]ctccgtgtatcttttggaaacatt
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- MNT_HUMAN HDAC1_HUMAN NRF1_HUMAN TAF9B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | -0.98 | 1.50 | 1.33 | n/a | n/a | |||
| HDAC1_HUMAN | -0.69 | 1.58 | 1.33 | n/a | n/a | |||
| NRF1_HUMAN | -0.18 | 1.55 | 1.17 | n/a | No Hit | |||
| TAF9B_HUMAN | -1.77 | 1.95 | 1.00 | n/a | n/a | |||
| MTG16_HUMAN | -1.67 | 1.83 | 1.33 | n/a | n/a |
Items per page:
1 – 5 of 9
Motif analysis
