ADASTRA v1.6.10
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rs210209
chr6:33546681
C
>
T
Sequence
cctgggttcacgccattctcctgc[C/T]tgtatctgggactacaggcgcctg
ASB in cell types
K562 (myelogenous leukemia)
Search SNPs nearby
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.35
0.49
1.00
0.02
2.99
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
obesity with early age of onset (age >2)
,
parkinsons disease
,
refractive error
GTEx eQTL
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale