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rs2107367 chr19:1021328 A>G

Sequence
ccaccgcggctatgaggccagtat[A/G]aggcggtaaaattacgataagata
ASB in cell types
breast tumor tissue GM12878 (female B-cells)
ASB for transcription factors
ESR1_HUMAN FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 2.83 n/a 5.4·10-51.00 2.50 n/a No Hit
FOXK2_HUMAN 1.52 -0.68 6.8·10-31.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Heart_Atrial_Appendage Whole_Blood

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