ADASTRA v1.6.10
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rs210840
chr8:40373409
C
>
T
Sequence
ggaaagtgttgcagaatcacattt[C/T]aaaaaatgcctttctgttccagag
ASB in cell types
T47D (invasive ductal carcinoma)
LNCaP (prostate carcinoma)
HepG2 (hepatoblastoma)
ASB for transcription factors
FOXA1_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
0.87
0.89
0.74
0.04
1.49
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
abnormal involuntary movement scale
,
alzheimers disease
,
hdl cholesterol
,
schizophrenia
,
triglycerides
GTEx eQTL
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)