rs2110585 chr5:134176930 C>A
- Sequence
gcgttagcgaaggaagagaaaaac[C/A]gaagacgaagccactacagcgtcg
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells) CD14+ monocytes Th2-cells
- ASB for transcription factors
- FOXK2_HUMAN STAT1_HUMAN MAF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.24 | n/a | 1.33 | n/a | n/a | |||
| STAT1_HUMAN | 1.16 | n/a | 2.50 | n/a | No Hit | |||
| MAF_HUMAN | 1.58 | -1.67 | 2.25 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood