ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs211411
chr10:32106064
T
>
C
Sequence
tactttacaaagcgttttcatgta[T/C]atatctctttcaacattcacaatt
ASB in cell types
HepG2 (hepatoblastoma)
CWR22 (prostate carcinoma)
ASB for transcription factors
FOXA2_HUMAN
FOXA1_HUMAN
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN
-0.58
0.73
1.00
1.7·10
-5
1.33
n/a
No Hit
FOXA1_HUMAN
-1.35
1.49
1.00
1.9·10
-5
1.37
n/a
No Hit
ANDR_HUMAN
-0.11
0.96
1.00
0.04
1.33
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
total cholesterol
GTEx eQTL
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)