rs2114430 chr2:64283948 C>T
- Sequence
ctcctaccccagtgtgaattaggc[C/T]gagttaggctctcccccagtcttt
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN MEIS2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.08 | 1.99 | 1.56 | n/a | No Hit | |||
| MEIS2_HUMAN | n/a | 2.38 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Colon_Sigmoid, Esophagus_Mucosa, Heart_Left_Ventricle, Nerve_Tibial, Testis, Thyroid, Whole_Blood