rs2160224 chr7:12067619 A>T
- Sequence
gccaataccaagaggggcctagac[A/T]cccaaaagggaagcggccagagtg
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -0.13 | 1.12 | 1.79 | n/a | n/a | |||
| SMC3_HUMAN | -0.36 | 1.07 | 1.90 | n/a | n/a | |||
| CTCF_HUMAN | 0.41 | 0.65 | 1.47 | n/a | No Hit |
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