rs216153 chr16:15822091 C>A
- Sequence
tggtcctacctgtggagtctggct[C/A]actgtcagaaagttggggcactta
- ASB in cell types
- A549 (lung carcinoma) HEK293 (embryonic kidney) HeLa Kyoto (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.90 | 0.47 | 1.56 | n/a | No Hit | |||
| SMC3_HUMAN | 0.97 | -0.04 | 1.92 | n/a | n/a |
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