ADASTRA v1.6.10
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rs216303
chr12:6049879
C
>
T
Sequence
tctgccctttttactggcctttga[C/T]ctttggcctctctcatgcaatcct
ASB in cell types
liver
ASB for transcription factors
HNF4A_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN
-1.55
1.73
1.00
0.03
1.33
-1.70
Weak Discordant
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Motif analysis
HNF4A_HUMAN
Weak Discordant
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Genetic associations
EMBL-EBI
low vwf levels
GRASP
ldl cholesterol
,
mitral annular calcium
,
total cholesterol
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
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