ADASTRA v1.6.10
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rs2167885
chr2:233487896
G
>
A
Sequence
gaaagtagaataagggggcagagc[G/A]acgggagcaatgatgaatccgttg
ASB in cell types
A549 (lung carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma)
0.90
-0.81
0.04
1.00
2.50
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
refractive error
GTEx eQTL
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Hypothalamus
,
Brain_Nucleus_accumbens_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
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