rs216885 chr12:5988789 G>C
- Sequence
ctgcacaagcccaggccaactgca[G/C]gcaggcagtcgcaatcgccaggtt
- ASB in cell types
- HEK293 (embryonic kidney) H1 (embryonic stem cells) MCF7 (Invasive ductal breast carcinoma) HCPEpiC (choroid plexus epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN KDM5B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.22 | 0.60 | 1.44 | n/a | No Hit | |||
| RAD21_HUMAN | 1.80 | 0.68 | 1.43 | n/a | n/a | |||
| KDM5B_HUMAN | -1.26 | 1.82 | 2.00 | n/a | n/a |
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