rs2180610 chr14:31038014 T>C
- Sequence
gtaacatgttgctacactttattg[T/C]gaaattcaaaataacataaagtgc
- ASB in cell types
- HepG2 (hepatoblastoma) LHSAR (prostate epithelial cells) liver SUM159PT (pleiomorphic breast carcinoma)
- ASB for transcription factors
- ANDR_HUMAN CEBPB_HUMAN CEBPG_HUMAN CEBPA_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.42 | 1.94 | 1.83 | n/a | No Hit | |||
| CEBPB_HUMAN | -0.36 | 1.36 | 1.70 | 5.79 | Concordant | |||
| CEBPG_HUMAN | n/a | 2.62 | 2.00 | n/a | No Hit | |||
| CEBPA_HUMAN | -3.00 | 2.12 | 2.00 | -1.90 | Weak Discordant | |||
| HM20A_HUMAN | -2.19 | 2.24 | 1.33 | n/a | n/a |
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Motif analysis
