rs2181073 chr9:14010271 T>C
- Sequence
caaatattctgggtgttaaccata[T/C]actcaagcacagactgaaataaaa
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.90 | 1.58 | 1.50 | n/a | No Hit | |||
| ANDR_HUMAN | -0.14 | 1.35 | 1.44 | 1.06 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, hypertension (early onset hypertension), parkinsons disease (pd), stabilized warfarin dose