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rs218459 chr20:58636982 C>G

Sequence
tggttgagtccagctcctattcct[C/G]gcagctctgtgaggtccccaagga
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) -0.80 0.80 1.009.7·10-4 3.90
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol total cholesterol
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Mucosa Lung Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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