ADASTRA v1.6.10
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rs218652
chr21:36408524
C
>
T
Sequence
ctcgcccaagatcagaaccaggtc[C/T]ccggggattgcccacaggtaggtg
ASB in cell types
PC3 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
-0.59
1.10
1.00
0.04
1.33
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL
Artery_Tibial
,
Muscle_Skeletal
,
Nerve_Tibial
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)