rs219315 chr14:59969484 G>A
- Sequence
ctgtgctatgatgtgtacataatg[G/A]gtcaggataaatatttatgttccg
- ASB in cell types
- breast tumor tissue prostate tumor
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -2.83 | 2.72 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | -0.60 | 2.71 | 2.50 | n/a | No Hit | |||
| ANDR_HUMAN | -0.67 | 1.42 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), hdl cholesterol, mitral annular calcium, neuroblastoma (brain cancer), triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood