rs2196039 chr3:380956 A>G
- Sequence
cttggagatgaatcaggcatataa[A/G]caaatatgtactggacaaacagaa
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.38 | 1.12 | 1.49 | 1.36 | Weak Concordant |
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Motif analysis
