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rs2208588 chr20:54180432 T>A

Sequence
catatgaaacagtggtgtttacag[T/A]attgaggaggaagtttctcagagt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) -0.32 1.55 0.833.5·10-4 4.92
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Motif analysis

No data available

Genetic associations

GRASP college completion neuroticism response to lithium treatment for bipolar disorder urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Nucleus_accumbens_basal_ganglia Esophagus_Mucosa

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