rs2209175 chr1:16614029 T>C
- Sequence
gtcactctcaaaaagaataaccaa[T/C]gtgtcaatggcacttgtagttatt
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) HEK293T (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- ZFX_HUMAN LMBL2_HUMAN ZN335_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | -0.65 | 2.89 | 1.67 | n/a | No Hit | |||
| LMBL2_HUMAN | n/a | 1.84 | 3.00 | n/a | n/a | |||
| ZN335_HUMAN | n/a | 3.99 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | -0.75 | 1.68 | 2.27 | n/a | No Hit | |||
| ZXDB_HUMAN | n/a | 3.51 | 2.00 | n/a | n/a |
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