ADASTRA v1.6.10
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rs2230754
chr12:94149730
C
>
T
Sequence
cttcccctactacccctacaacta[C/T]acgagcggcgctgccaccggctgg
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
EZH2_HUMAN
CXXC1_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EZH2_HUMAN
1.02
-0.82
0.04
1.00
1.11
n/a
n/a
CXXC1_HUMAN
1.62
-1.44
0.05
1.00
1.00
n/a
n/a
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5
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Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
schizophrenia
,
variant creutzfeldt-jakob disease
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)