ADASTRA v1.6.10
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adastra.autosome.org
rs2232463
chr1:6595384
C
>
T
Sequence
ttctattaattgagatgagaccca[C/T]ccatcatggctgtggatcccaaac
ASB for transcription factors
SP7_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP7_HUMAN
-1.75
2.11
1.00
0.04
2.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
chronic kidney disease
,
ldl cholesterol
,
total cholesterol
GTEx eQTL
Artery_Tibial
,
Colon_Transverse
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)