rs2232498 chr16:77190992 G>T
- Sequence
cagccgtagccagatccgttgaaa[G/T]gagtgcagagaggtctcattgcgc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) CD14+ monocytes
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN ENL_HUMAN NRF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.19 | 0.99 | 1.28 | n/a | No Hit | |||
| STAT1_HUMAN | 1.93 | n/a | 2.50 | n/a | No Hit | |||
| ENL_HUMAN | 1.40 | -1.01 | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | 1.51 | -0.18 | 1.83 | n/a | No Hit |
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