rs2232809 chr1:171781041 C>A
- Sequence
gctagttttgcatgctgtgctttg[C/A]ggagagaaggaagagggagttttc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- MNT_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | -0.34 | 1.35 | 2.37 | n/a | n/a | |||
| SMCA4_HUMAN | -1.10 | 1.86 | 3.00 | n/a | n/a |
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