ADASTRA v1.6.10
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adastra.autosome.org
rs2241573
chr11:129923410
A
>
G
Sequence
gcgcacgtgttttttcacctggtg[A/G]taagaaccacaggaaaattcaggg
ASB in cell types
tibial nerve
epidermal keratinocytes
RH4 (alveolar rhabdomyosarcoma)
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
tibial nerve
-1.59
1.81
1.00
5.0·10
-3
1.00
epidermal keratinocytes
1.79
0.28
7.5·10
-3
0.71
2.00
RH4 (alveolar rhabdomyosarcoma)
2.18
-2.82
0.04
1.00
2.00
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Motif analysis
No data available
Genetic associations
GRASP
abnormal involuntary movement scale
,
age at death with kuru exposure
,
birth weight
,
infant head circumference
,
primary rhegmatogenous retinal detachment
,
triglycerides
GTEx eQTL
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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