rs2242523 chr19:35740745 C>T
- Sequence
ttttcacccccctccagcctgctc[C/T]gcacgaagctccgcccactcccgg
- ASB in cell types
- HEK293 (embryonic kidney) A549 (lung carcinoma) GM12878 (female B-cells) K562 (myelogenous leukemia)
- ASB for transcription factors
- JUN_HUMAN FOXK2_HUMAN ZN394_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.23 | -0.39 | 1.78 | n/a | No Hit | |||
| FOXK2_HUMAN | 0.96 | 2.53 | 1.17 | n/a | n/a | |||
| ZN394_HUMAN | 3.44 | n/a | 4.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, aortic valve calcium, hdl cholesterol change with statins, height, ldl cholesterol change with statins, serum creatinine, total cholesterol change with statins