ADASTRA v1.6.10
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adastra.autosome.org
rs224778
chr12:126036694
T
>
C
Sequence
tgctggtctgtaacattgtgatta[T/C]gtgcaagtgtctgtgacagaaaag
ASB in cell types
VCaP (prostate carcinoma)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
VCaP (prostate carcinoma)
1.42
-1.43
0.04
1.00
1.33
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
brain atrophy
,
diastolic blood pressure (dbp)
,
infant head circumference
,
neuroblastoma (brain cancer)
,
primary rhegmatogenous retinal detachment
,
systolic blood pressure (sbp)
GTEx eQTL
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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