rs2247998 chr16:85767839 G>A
- Sequence
agagtctgggtggggcagagctca[G/A]agcagctatgcccaacattcctgg
- ASB in cell types
- HAEC (human aortic endothelial cells) A549 (lung carcinoma) HCT-116 (colon carcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZBT17_HUMAN PRDM9_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT17_HUMAN | 2.08 | -1.99 | 1.33 | n/a | No Hit | |||
| PRDM9_HUMAN | 2.37 | -3.41 | 2.00 | n/a | n/a |
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