rs2249445 chr10:7409279 A>G
- Sequence
cccgggacagttagtccttttaat[A/G]agcacctcctcgccccacctactc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- KDM1A_HUMAN HDAC2_HUMAN HDAC1_HUMAN PF21A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | -2.77 | 2.01 | 3.00 | n/a | n/a | |||
| HDAC2_HUMAN | -1.94 | 2.25 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -0.74 | 1.67 | 2.00 | n/a | n/a | |||
| PF21A_HUMAN | -2.17 | 2.25 | 2.00 | n/a | n/a | |||
| LMBL2_HUMAN | -1.88 | 1.95 | 2.00 | n/a | n/a |
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